Lead-DBS User Guide
Search
⌃K
Introduction
How to contribute to Lead-DBS
Installation
Dependencies
Installation
Lead-DBS
Overview
1. Load Patient Folder
2. Image Import
3. Volume Registrations
4. (optional) Surface Reconstruction
5. (optional) Reconstruction of Electrode Trajectories
6. (optional) Perform Connectivity Analysis
7. Visualization
Reconstruction Statistics
Untitled
Lead-Group
Group analyses with Lead-DBS
Setup Analysis
General Settings
Group Visualization
Calculate VTA and Stats
Sweetspot Explorer
Connectomics
Connectomics
Lead Connectome Mapper
Lead-OR
Imaging setup
Electrophysiology setup
Using the platform
Appendix
Code Backbone
Acquiring and Installing Atlases
Troubleshooting / Specific Help
WarpDrive
Command line interface
Matlab scripting examples
Using Slicer
Sweet-sour spot
Powered By GitBook

Using Slicer

3D Slicer is a general purpose medical image analysis and processing software. Here are included some examples of using Slicer for creating some visualizations. You can check out Slicer home page: https://www.slicer.org/ and download: https://download.slicer.org/​
Previous
Warping a normative connectome to native subject space
Next
Sweet-sour spot
Last modified 8mo ago
Copy link