Lead-DBS User Guide
Ctrlk
  • Introduction
  • How to contribute to Lead-DBS
  • Installation
  • Lead-DBS
    • Overview
    • Self-Tutoring with Lead-Tutor
    • 1. Load Patient Folder
    • 2. Image Import
    • 3. Volume Registrations
    • 4. (optional) Surface Reconstruction
    • 5. (optional) Reconstruction of Electrode Trajectories
      • Orientation of Directional Leads
        • Prerequisites
        • Automatic Algorithm
        • Possible Problems with the Automatic Algorithm
        • User-Assisted Algorithm (Manual Refine)
      • TRAC/CORE Details
      • Manual Reconstruction
      • Reconstruction File
    • 6. (optional) Perform Connectivity Analysis
    • 7. Visualization
    • Reconstruction Statistics
  • Lead-Group
    • Group analyses with Lead-DBS
    • Setup Analysis
    • General Settings
    • Group Visualization
    • Calculate VTA and Stats
    • Sweetspot Explorer
  • Connectomics
    • Connectomics
    • Lead Connectome Mapper
  • Lead-OR
    • Imaging setup
    • Electrophysiology setup
    • Using the platform
  • Appendix
    • Code Backbone
    • Acquiring and Installing Atlases
    • Troubleshooting / Specific Help
    • Command line interface
    • Matlab scripting examples
    • Using Slicer
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  1. Lead-DBS
  2. 5. (optional) Reconstruction of Electrode Trajectories
  3. Orientation of Directional Leads

User-Assisted Algorithm (Manual Refine)

(Coming soon)

PreviousPossible Problems with the Automatic AlgorithmNextTRAC/CORE Details

Last updated 3 years ago