Lead-DBS User Guide
WarpDrive is a feature used to manually correct for misalignments after image normalization. It used currently under development but can already be accessed enabling the developer mode in Lead-DBS. For using WarpDrive, we suggest to use the develop branch from git and follow the next steps:
  1. 1.
    Install Slicer. (Being familiarized with Slicer will help then to navigate the views. There is documentation on this from their user manual).
  2. 2.
    Launch Slicer and install the MarkupsToModel and SlicerRT extensions from the Extensions Manager).
  3. 3.
    Enable developer mode in Lead-DBS:
    1. 1.
      Launch Lead-DBS and go to Preferences -> Edit Preferences File...
    2. 2.
      Set the variable prefs.env.dev=1 (~ line 210).
You're ready to go! Check the Refine Atlas Fit checkbox to run WarpDrive in Slicer. If you never opened Slicer from Lead-DBS before you will be prompted to enter it's file location. WarpDrive is still under development and we are working on a better way to install and launch it.
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